Deconvolution of bulk sequencing experiments using single cell data
BSeq-sc is a bioinformatics analysis pipeline that leverages single-cell sequencing data to estimate cell type proportion and cell type-specific gene expression differences from RNA-seq data from bulk tissue samples. This is a companion package to the publication "A single-cell transcriptomic map of the human and mouse pancreas reveals inter- and intra-cell population structure." Baron et al. Cell Systems (2016) https://www.ncbi.nlm.nih.gov/pubmed/27667365.
System | Target | Derivation | Build status |
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x86_64-linux | /gnu/store/yh1dvrmkcjmpb7qgjb17jk04c0y5dicv-r-bseqsc-1.0-1.fef3f3e.drv | ||
mips64el-linux | /gnu/store/8jnyk1vja0vmfqn02zdbhsxkzjcxrm78-r-bseqsc-1.0-1.fef3f3e.drv | ||
i686-linux | /gnu/store/nc02magl5q0z0fvwx1zxrahj3078kvnz-r-bseqsc-1.0-1.fef3f3e.drv | ||
armhf-linux | /gnu/store/az9k4hsnl131yywklq3qzdg4bfdxj6jp-r-bseqsc-1.0-1.fef3f3e.drv | ||
aarch64-linux | /gnu/store/2ijizgfn1fl362jfiqgj23k9c327g61m-r-bseqsc-1.0-1.fef3f3e.drv |
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description Validate package descriptions | sentences in description should be followed by two spaces; possible infraction at 395 |