Clustering, differential expression, and trajectory analysis for single-cell RNA-Seq
Monocle performs differential expression and time-series analysis for single-cell expression experiments. It orders individual cells according to progress through a biological process, without knowing ahead of time which genes define progress through that process. Monocle also performs differential expression analysis, clustering, visualization, and other useful tasks on single cell expression data. It is designed to work with RNA-Seq and qPCR data, but could be used with other types as well.
System | Target | Derivation | Build status |
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x86_64-linux | /gnu/store/d98bvzw2ddgc09xcwisilcgms8412dhz-r-monocle-2.14.0.drv | ||
mips64el-linux | /gnu/store/bgx4afyxhpzli9185yyybbxknisyz9pi-r-monocle-2.14.0.drv | ||
i686-linux | /gnu/store/lgkfzbwz7iax0mmldjqkxhlpq1cpxlc4-r-monocle-2.14.0.drv | ||
armhf-linux | /gnu/store/bbdzcn1rjjlwf50swmir7gywlfzy58qx-r-monocle-2.14.0.drv | ||
aarch64-linux | /gnu/store/kvg2qsxyzd6zrmymaxlbiasgr663x6pa-r-monocle-2.14.0.drv |
Linter | Message | Location |
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formatting Look for formatting issues in the source | line 2583 is way too long (101 characters) | |
derivation Report failure to compile a package to a derivation | failed to create x86_64-linux derivation: path ‘/gnu/store/4p9szwg3x3kprhf2xg70s6xf91gvw5vm-r-minimal-3.6.2.drv’ is not valid | |
derivation Report failure to compile a package to a derivation | failed to create i686-linux derivation: path ‘/gnu/store/2f4hwvm2isrsbi0zvsgw58ab6g6ckig0-patch-2.7.6.drv’ is not valid | |
derivation Report failure to compile a package to a derivation | failed to create armhf-linux derivation: path ‘/gnu/store/132aqp4qjfys7abpr30jklkd33dl5lc1-patch-2.7.6.drv’ is not valid | |
derivation Report failure to compile a package to a derivation | failed to create aarch64-linux derivation: path ‘/gnu/store/09hhdxcfrm56afpglx3ff2dj4ibfl92x-sed-4.7.drv’ is not valid | |
derivation Report failure to compile a package to a derivation | failed to create mips64el-linux derivation: path ‘/gnu/store/110f2jlvf1bgwppx81sa07nc53c5v7vd-gzip-1.10.drv’ is not valid |