Quantification from RNA-seq reads using lightweight alignments
Salmon is a program to produce highly-accurate, transcript-level quantification estimates from RNA-seq data. Salmon achieves its accuracy and speed via a number of different innovations, including the use of lightweight alignments (accurate but fast-to-compute proxies for traditional read alignments) and massively-parallel stochastic collapsed variational inference.
System | Target | Derivation | Build status |
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x86_64-linux | /gnu/store/s1g2rlbzf1cqais19hxkjdqnqjnn7v7d-salmon-0.13.1.drv | ||
mips64el-linux | /gnu/store/7szl5kj4iayg3x7fp3zj22c279jynlak-salmon-0.13.1.drv | ||
i686-linux | /gnu/store/fyx06biadzq3gl32d82lyvvj7z4cc6l1-salmon-0.13.1.drv | ||
armhf-linux | /gnu/store/zjhq7f2kk6jv7ikgmvqzdabw82l6kbca-salmon-0.13.1.drv | ||
aarch64-linux | /gnu/store/zrl520hf1bpxqhj5bcw8h3llqpp36l6d-salmon-0.13.1.drv |
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formatting Look for formatting issues in the source | line 11879 is way too long (99 characters) |