Quantification from RNA-seq reads using lightweight alignments
Salmon is a program to produce highly-accurate, transcript-level quantification estimates from RNA-seq data. Salmon achieves its accuracy and speed via a number of different innovations, including the use of lightweight alignments (accurate but fast-to-compute proxies for traditional read alignments) and massively-parallel stochastic collapsed variational inference.
System | Target | Derivation | Build status |
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x86_64-linux | /gnu/store/5x28m4d7bz3pmwg1j1janp4wcj0v42s9-salmon-1.4.0.drv | ||
x86_64-linux | i586-pc-gnu | /gnu/store/9f3drgz3f8b6jiapx5rqlb6n8iw1j59h-salmon-1.4.0.drv | |
x86_64-linux | arm-linux-gnueabihf | /gnu/store/012fkgrcwmsqrc2hksq5bjvly88x006m-salmon-1.4.0.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/47q1s6r8krmclmaqjl7x7ph093n861zl-salmon-1.4.0.drv | |
powerpc64le-linux | /gnu/store/sn7i007b25myimr12p5r1px6mhmjsrsm-salmon-1.4.0.drv | ||
mips64el-linux | /gnu/store/k41qhxjpflidp9pnpnv7n0i2sh5q5q4p-salmon-1.4.0.drv | ||
i686-linux | /gnu/store/h0qw585kk3cnd1f7bhmbr738brfqm005-salmon-1.4.0.drv | ||
i586-gnu | /gnu/store/i872j9744ah1zx2k2i1bwmssxalljrb8-salmon-1.4.0.drv | ||
armhf-linux | /gnu/store/rmbgj7whlqwkl3gb0mn7spxmrp14i09n-salmon-1.4.0.drv | ||
aarch64-linux | /gnu/store/n6siz0m23y8vvbnrs01afbmwbqcvllcr-salmon-1.4.0.drv |
Linter | Message | Location |
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formatting Look for formatting issues in the source | line 9772 is way too long (92 characters) |