Short read sequence database utilities
Screed parses FASTA and FASTQ files and generates databases. Values such as sequence name, sequence description, sequence quality and the sequence itself can be retrieved from these databases.
| System | Target | Derivation | Build status |
|---|---|---|---|
| x86_64-linux | /gnu/store/al78fkspljsv1ci8sx6a4wf4vfpfj0ig-python2-screed-1.0.drv | ||
| powerpc-linux | /gnu/store/ayz2nxfilay0imck0p80af7n5dc07dbj-python2-screed-1.0.drv | ||
| powerpc64le-linux | /gnu/store/9za2f2limjnnlr3f3i11kzqwscqmivhl-python2-screed-1.0.drv | ||
| mips64el-linux | /gnu/store/3kl58yllkgbwh6ccl09ifjzs6scc15sr-python2-screed-1.0.drv | ||
| i686-linux | /gnu/store/3s1fvg768zwybb67azigvsy3ls6bx3aj-python2-screed-1.0.drv | ||
| i586-gnu | /gnu/store/nfrx8656z42ar3ddmr1mhc1l4cr5hrqj-python2-screed-1.0.drv | ||
| armhf-linux | /gnu/store/3rb5plgj9ndz78904s0ynrxnknjd2bca-python2-screed-1.0.drv | ||
| aarch64-linux | /gnu/store/fzzvr07iyfyazzf0nkcdfblxj6amkfc7-python2-screed-1.0.drv |
| Linter | Message | Location |
|---|---|---|
| input-labels Identify input labels that do not match package names | label 'python-pytest' does not match package name 'python2-pytest' | |
| input-labels Identify input labels that do not match package names | label 'python-pytest-cov' does not match package name 'python2-pytest-cov' | |
| input-labels Identify input labels that do not match package names | label 'python-pytest-runner' does not match package name 'python2-pytest-runner' | |
| input-labels Identify input labels that do not match package names | label 'python-bz2file' does not match package name 'python2-bz2file' |