Quantification from RNA-seq reads using lightweight alignments
Salmon is a program to produce highly-accurate, transcript-level quantification estimates from RNA-seq data. Salmon achieves its accuracy and speed via a number of different innovations, including the use of lightweight alignments (accurate but fast-to-compute proxies for traditional read alignments) and massively-parallel stochastic collapsed variational inference.
System | Target | Derivation | Build status |
---|---|---|---|
x86_64-linux | /gnu/store/avhggbgpxncia0zxk0drq5qr23r08v4a-salmon-0.13.1.drv | ||
x86_64-linux | i586-pc-gnu | /gnu/store/c2nv2hqcw4hy93rj6adwijwk5f9pf1p0-salmon-0.13.1.drv | |
x86_64-linux | arm-linux-gnueabihf | /gnu/store/crxlhwdhfq2b09fi48x8p01x7lm5rw8r-salmon-0.13.1.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/8nvgl1qbj2n7di416bv9mpmlskds3a4w-salmon-0.13.1.drv | |
powerpc64le-linux | /gnu/store/2l341gvhyng38ckrggkbyvydp5dgp1nh-salmon-0.13.1.drv | ||
mips64el-linux | /gnu/store/i4xvrymf9sgv7y08x2dj95g78q8jpxi1-salmon-0.13.1.drv | ||
i686-linux | /gnu/store/wip5l0s88l7vc1svk9pqx16024313pj7-salmon-0.13.1.drv | ||
i586-gnu | /gnu/store/rbv0hkcaqzbk8dp78wg4wlr25p0d1a83-salmon-0.13.1.drv | ||
armhf-linux | /gnu/store/xy3sbgkqsh0311814i9gglc7crpyydk1-salmon-0.13.1.drv | ||
aarch64-linux | /gnu/store/zvzy837vg3mpqyj0md9c3cgslyb322z0-salmon-0.13.1.drv |
Linter | Message | Location |
---|---|---|
formatting Look for formatting issues in the source | line 11147 is way too long (99 characters) |