Copy number variant detection from targeted DNA sequencing
CNVkit is a Python library and command-line software toolkit to infer and visualize copy number from high-throughput DNA sequencing data. It is designed for use with hybrid capture, including both whole-exome and custom target panels, and short-read sequencing platforms such as Illumina and Ion Torrent.
| System | Target | Derivation | Build status |
|---|---|---|---|
| x86_64-linux | /gnu/store/9b65rqsvyjs5yrnlz31l58kjibhs2bfn-cnvkit-0.9.10.drv | ||
| riscv64-linux | /gnu/store/hfqy0afmskij7gxb3fz0qj1682k17lig-cnvkit-0.9.10.drv | ||
| powerpc-linux | /gnu/store/9jmk0wjggy8y244klqsgxbaryk24rmlp-cnvkit-0.9.10.drv | ||
| powerpc64le-linux | /gnu/store/457pgs8sk2c7j54f3sjv789nqy2hpm7b-cnvkit-0.9.10.drv | ||
| i686-linux | /gnu/store/04b9zidvr63zq3v8rq1wjz1iymfjfm6f-cnvkit-0.9.10.drv | ||
| i586-gnu | /gnu/store/4p4lc4ib21iz70ywla7fpbfhllvh0vqr-cnvkit-0.9.10.drv | ||
| armhf-linux | /gnu/store/g1zriqxjv7ssya5cc1qpb7v55qhiwafc-cnvkit-0.9.10.drv | ||
| aarch64-linux | /gnu/store/ksnh2088gyyj8aw1ymh2b6w0kl74zi9r-cnvkit-0.9.10.drv |
| Linter | Message | Location |
|---|---|---|
| No lint warnings ✓ | ||