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Package: megadepth @ 1.1.1

Synopsis

BigWig and BAM/CRAM related utilities

Description

Megadepth is an efficient tool for extracting coverage related information from RNA and DNA-seq BAM and BigWig files. It supports reading whole-genome coverage from BAM files and writing either indexed TSV or BigWig files, as well as efficient region coverage summary over intervals from both types of files.

Home page
https://github.com/ChristopherWilks/megadepth
Location
gnu/packages/bioinformatics.scm (line: 23669, column: 2)
License

Derivations

SystemTargetDerivationBuild status
x86_64-linux/gnu/store/p5a868cw5lmcm5gfc43ccb30pwzdx38g-megadepth-1.1.1.drv
x86_64-linuxx86_64-w64-mingw32/gnu/store/p83z2bfz6420g12087a6xg0y9gq111k6-megadepth-1.1.1.drv
x86_64-linuxx86_64-pc-gnu/gnu/store/rcxrxm6y0axdh0nalw1js6zwwxq23bgv-megadepth-1.1.1.drv
    x86_64-linuxx86_64-linux-gnux32/gnu/store/xxp6cwrapa95n4wp65xy7qj8ssa94yzs-megadepth-1.1.1.drv
      x86_64-linuxriscv64-linux-gnu/gnu/store/i2hrp8xh8mnhx7nqc5yjxnfz3b6m4mb4-megadepth-1.1.1.drv
      x86_64-linuxpowerpc-linux-gnu/gnu/store/vlyp98qk9qxkh25hc8bmmv631ynmlh0v-megadepth-1.1.1.drv
        x86_64-linuxpowerpc64-linux-gnu/gnu/store/0amzf50y934ah7kih3my3mazbch05rnz-megadepth-1.1.1.drv
          x86_64-linuxpowerpc64le-linux-gnu/gnu/store/fwyx10g8fahhida9gk1mn0m5mi21s6c8-megadepth-1.1.1.drv
          x86_64-linuxmips64el-linux-gnu/gnu/store/bq2v7zxza25kc89b6pywaf5j8dpx7kpv-megadepth-1.1.1.drv
            x86_64-linuxloongarch64-linux-gnu/gnu/store/8rfkdp299iq46f23akkpnxachrl4i5vf-megadepth-1.1.1.drv
              x86_64-linuxi686-w64-mingw32/gnu/store/vnwpfx4rsl3brsgs3j515k88kyfx7v54-megadepth-1.1.1.drv
                x86_64-linuxi586-pc-gnu/gnu/store/hsyqhqnbdkwrxjfzxxzzhvc0mgrczz3v-megadepth-1.1.1.drv
                x86_64-linuxarm-linux-gnueabihf/gnu/store/dzfxxfnpww7mxrhd2zq0qp1snisgr8fc-megadepth-1.1.1.drv
                x86_64-linuxaarch64-linux-gnu/gnu/store/p6gcy3glk4al2byk6j62pnw1fxlgla8l-megadepth-1.1.1.drv
                x86_64-gnu/gnu/store/2q5132y02h52hf4j4sy0pf4srlyfzplj-megadepth-1.1.1.drv
                  riscv64-linux/gnu/store/6rv27whxn5bq6v5ib3qppkgx2h7r89n5-megadepth-1.1.1.drv
                  powerpc-linux/gnu/store/c4wjfrh3r1f2rjdh3k7q2qxpx5l1m19j-megadepth-1.1.1.drv
                    powerpc64le-linux/gnu/store/c591p6wf8vkxlv1c8xpjsk3p4g1m4car-megadepth-1.1.1.drv
                    mips64el-linux/gnu/store/49xad03qc6zfv5hc3x4f9cldcl039ahh-megadepth-1.1.1.drv
                      i686-linux/gnu/store/89r3f8pyqjy7xjx5np32lh5iwgj1dxch-megadepth-1.1.1.drv
                      i586-gnu/gnu/store/gygq1b370lfy24hch9j4fgcyvpbxh22y-megadepth-1.1.1.drv
                        armhf-linux/gnu/store/zhiqrlcipkq8f48501s5vw8n3wi2vwab-megadepth-1.1.1.drv
                        aarch64-linux/gnu/store/17g52v19qpcmznx6l7mjlm58n0p06763-megadepth-1.1.1.drv

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