Quantification from RNA-seq reads using lightweight alignments
Salmon is a program to produce highly-accurate, transcript-level quantification estimates from RNA-seq data. Salmon achieves its accuracy and speed via a number of different innovations, including the use of lightweight alignments (accurate but fast-to-compute proxies for traditional read alignments) and massively-parallel stochastic collapsed variational inference.
System | Target | Derivation | Build status |
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x86_64-linux | /gnu/store/162rmvx5536zgjf71zifjms413gnbl4k-salmon-0.13.1.drv | ||
x86_64-linux | arm-linux-gnueabihf | /gnu/store/9brinv08zl30p6ky8990dqmvdv2lk50m-salmon-0.13.1.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/9n9998qraq2g62wzaydhfmwn6njqrk12-salmon-0.13.1.drv | |
mips64el-linux | /gnu/store/j0lv4afnykl5n2fkj3c05ynm74g7mmix-salmon-0.13.1.drv | ||
i686-linux | /gnu/store/ina51ld87ci85khspz7rm75smk2ki8b4-salmon-0.13.1.drv | ||
armhf-linux | /gnu/store/mgihrvjwdgqxxnk8iibl120zy0x0qax7-salmon-0.13.1.drv | ||
aarch64-linux | /gnu/store/928xhim4wlwbn47hzfq3nj1d07cbc7r2-salmon-0.13.1.drv |
Linter | Message | Location |
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formatting Look for formatting issues in the source | line 11892 is way too long (99 characters) |