Rapid sequence adapter trimming, identification, and read merging
This program searches for and removes remnant adapter sequences from High-Throughput Sequencing (HTS) data and (optionally) trims low quality bases from the 3' end of reads following adapter removal. AdapterRemoval can analyze both single end and paired end data, and can be used to merge overlapping paired-ended reads into (longer) consensus sequences. Additionally, the AdapterRemoval may be used to recover a consensus adapter sequence for paired-ended data, for which this information is not available.
| System | Target | Derivation | Build status |
|---|---|---|---|
| x86_64-linux | /gnu/store/02nk1m707h022zmz05adj3s7ahs7w5qv-adapterremoval-2.3.0.drv | ||
| mips64el-linux | /gnu/store/d2dfbfj98rlb7xlzcglgpx94krlhrpik-adapterremoval-2.3.0.drv | ||
| i686-linux | /gnu/store/8nbykjhjyvszpnr2q356f1sj58qzdr5l-adapterremoval-2.3.0.drv | ||
| armhf-linux | /gnu/store/i7ngydcr1lgnyfj8swl1nj1yzgsx36q1-adapterremoval-2.3.0.drv | ||
| aarch64-linux | /gnu/store/c7xgy7ipmwppbzi9ccjm1gvnajq2m1ff-adapterremoval-2.3.0.drv |
| Linter | Message | Location |
|---|---|---|
| derivation Report failure to compile a package to a derivation | failed to create i686-linux derivation: path ‘/gnu/store/imq41gd3q2767il9gq6mqh5cv44x09rf-guile-2.2.6.drv’ is not valid | |
| derivation Report failure to compile a package to a derivation | failed to create armhf-linux derivation: path ‘/gnu/store/9wn798a6w534mnn4f28lglbjmib9n392-zlib-1.2.11.drv’ is not valid | |
| derivation Report failure to compile a package to a derivation | failed to create aarch64-linux derivation: path ‘/gnu/store/0afbxr7962z9ci6kw840n088qsmyz8lr-guile-2.2.6.drv’ is not valid | |
| derivation Report failure to compile a package to a derivation | failed to create mips64el-linux derivation: path ‘/gnu/store/aiwgcl5dppar2s8l408bshywjybsy3nd-zlib-1.2.11.drv’ is not valid |