Quantification from RNA-seq reads using lightweight alignments
Salmon is a program to produce highly-accurate, transcript-level quantification estimates from RNA-seq data. Salmon achieves its accuracy and speed via a number of different innovations, including the use of lightweight alignments (accurate but fast-to-compute proxies for traditional read alignments) and massively-parallel stochastic collapsed variational inference.
System | Target | Derivation | Build status |
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x86_64-linux | /gnu/store/sdpy4wch1a3qcxg8llxaghh1chjxdgm3-salmon-1.4.0.drv | ||
x86_64-linux | i586-pc-gnu | /gnu/store/grpbcykzr0nx8xq0l1w9qagf1naxjd6r-salmon-1.4.0.drv | |
x86_64-linux | arm-linux-gnueabihf | /gnu/store/phkq023xd8fsgwfpsrvxbzd6s2g86v0c-salmon-1.4.0.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/x5lysvwg2qfm0pd3cm47frf0yyz2vk0l-salmon-1.4.0.drv | |
powerpc64le-linux | /gnu/store/sqwn00h3nw9ss3p7m0x49bmxfsydpn1j-salmon-1.4.0.drv | ||
mips64el-linux | /gnu/store/nmcm4wfciq816jijsm1g8pm525yhk97d-salmon-1.4.0.drv | ||
i686-linux | /gnu/store/lkpxp8z4xcg7qf34k0x91h2fzslwv216-salmon-1.4.0.drv | ||
i586-gnu | /gnu/store/jp05was80av22nrr6vnbj9awzw7k35l8-salmon-1.4.0.drv | ||
armhf-linux | /gnu/store/7kamffxi1c35kpkvbzsr312grzmx0cyr-salmon-1.4.0.drv | ||
aarch64-linux | /gnu/store/l3z8wya7nw7rizg0pfxdi34silf5rihi-salmon-1.4.0.drv |
Linter | Message | Location |
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formatting Look for formatting issues in the source | line 9806 is way too long (92 characters) |