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Package: adapterremoval @ 2.3.3

Synopsis

Rapid sequence adapter trimming, identification, and read merging

Description

This program searches for and removes remnant adapter sequences from High-Throughput Sequencing (HTS) data and (optionally) trims low quality bases from the 3' end of reads following adapter removal. AdapterRemoval can analyze both single end and paired end data, and can be used to merge overlapping paired-ended reads into (longer) consensus sequences. Additionally, the AdapterRemoval may be used to recover a consensus adapter sequence for paired-ended data, for which this information is not available.

Home page
https://adapterremoval.readthedocs.io/
Location
gnu/packages/bioinformatics.scm (line: 18701, column: 2)
License

Derivations

SystemTargetDerivationBuild status
x86_64-linux/gnu/store/vwj7di4v3xll59ybiv4nwwzxqszd5169-adapterremoval-2.3.3.drv
x86_64-linuxx86_64-w64-mingw32/gnu/store/yp07hgmdxkmsz634zh62m10hz4a8y04h-adapterremoval-2.3.3.drv
x86_64-linuxx86_64-linux-gnux32/gnu/store/pblyv7k9slx0f40m402ig06ir3fs72qh-adapterremoval-2.3.3.drv
    x86_64-linuxriscv64-linux-gnu/gnu/store/9crfan4619732h8knmixsqk1d71f6fhc-adapterremoval-2.3.3.drv
    x86_64-linuxpowerpc-linux-gnu/gnu/store/xd1sym4gy4dvkgn074drc4p3fdy47rdl-adapterremoval-2.3.3.drv
    x86_64-linuxpowerpc64-linux-gnu/gnu/store/afb2bg4bx303n0i0bc9x9kdmv16dnq2l-adapterremoval-2.3.3.drv
      x86_64-linuxpowerpc64le-linux-gnu/gnu/store/qfywqxyjbabq5gndpgdkzhyg35i60424-adapterremoval-2.3.3.drv
      x86_64-linuxor1k-elf/gnu/store/p0308k7p9apahp6dyamswk0j7lqdaikc-adapterremoval-2.3.3.drv
        x86_64-linuxmips64el-linux-gnu/gnu/store/zna1vplrg5c61wbfg3xvdrhij2apnsc1-adapterremoval-2.3.3.drv
        x86_64-linuxi686-w64-mingw32/gnu/store/8pzcgnlbyngb2bi25yiqk9b0rzmvbc5h-adapterremoval-2.3.3.drv
        x86_64-linuxi586-pc-gnu/gnu/store/3hqy290fp11ajimcwgs3haykjh72n577-adapterremoval-2.3.3.drv
        x86_64-linuxavr/gnu/store/0r1434vs0zczgmq3bq0kr1zhd9c8vccv-adapterremoval-2.3.3.drv
        x86_64-linuxarm-linux-gnueabihf/gnu/store/bad4jw84h1xzim2p3qs9ms4nwwhi3l0f-adapterremoval-2.3.3.drv
        x86_64-linuxaarch64-linux-gnu/gnu/store/n5zjqxjc8x0ripcrm1qbmbcaxa32kr0p-adapterremoval-2.3.3.drv
        riscv64-linux/gnu/store/a4nswc5iwr5yz0izr1wr0b8n0k2xv2w7-adapterremoval-2.3.3.drv
        powerpc-linux/gnu/store/mvz6gw0hf97swkirfai8ys9rf3xczgm6-adapterremoval-2.3.3.drv
          powerpc64le-linux/gnu/store/ncsjfnr7lm3gbl4nv23m3jq44yvwqcd6-adapterremoval-2.3.3.drv
          mips64el-linux/gnu/store/4pr7ypncc8asfvr93jbdhlmix4x1fpbd-adapterremoval-2.3.3.drv
            i686-linux/gnu/store/bslkm39mqk1k95yd5ncxwpawrd8cxci8-adapterremoval-2.3.3.drv
            i586-gnu/gnu/store/ca82dxwl51spk01xx32lxm2n8ivi7h1h-adapterremoval-2.3.3.drv
            armhf-linux/gnu/store/3camsy4pwyg8wp7hgb0s7xv6mwlcanba-adapterremoval-2.3.3.drv
            aarch64-linux/gnu/store/llklxdbhfwbx7dqj67xy4r37vsd4m1na-adapterremoval-2.3.3.drv

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