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Package: r-bionet @ 1.56.0

Synopsis

Functional analysis of biological networks

Description

This package provides functions for the integrated analysis of protein-protein interaction networks and the detection of functional modules. Different datasets can be integrated into the network by assigning p-values of statistical tests to the nodes of the network. E.g. p-values obtained from the differential expression of the genes from an Affymetrix array are assigned to the nodes of the network. By fitting a beta-uniform mixture model and calculating scores from the p-values, overall scores of network regions can be calculated and an integer linear programming algorithm identifies the maximum scoring subnetwork.

Home page
http://bioconductor.org/packages/release/bioc/html/BioNet.html
Location
gnu/packages/bioconductor.scm (line: 16126, column: 2)
License

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