Automated analysis of high-throughput qPCR data
Analysis of Ct values from high throughput quantitative real-time PCR (qPCR) assays across multiple conditions or replicates. The input data can be from spatially-defined formats such ABI TaqMan Low Density Arrays or OpenArray; LightCycler from Roche Applied Science; the CFX plates from Bio-Rad Laboratories; conventional 96- or 384-well plates; or microfluidic devices such as the Dynamic Arrays from Fluidigm Corporation. HTqPCR handles data loading, quality assessment, normalization, visualization and parametric or non-parametric testing for statistical significance in Ct values between features (e.g. genes, microRNAs).
| System | Target | Derivation | Build status |
|---|---|---|---|
| x86_64-linux | /gnu/store/qr2mjlp2bb5d6822nmzawnww3g791pjc-r-htqpcr-1.50.0.drv | ||
| riscv64-linux | /gnu/store/12bcj7iarwvz1ip4fil2jp31qym86zf5-r-htqpcr-1.50.0.drv | ||
| powerpc-linux | /gnu/store/krlwqqi9qgiwcq5945rsv1aa492dkjhd-r-htqpcr-1.50.0.drv | ||
| powerpc64le-linux | /gnu/store/qqgjv6maywlm97zi1wah0y9aa5v3k9k9-r-htqpcr-1.50.0.drv | ||
| mips64el-linux | /gnu/store/8jbsgnzgzh9vs3xhsnxvjdf2izvd8mgw-r-htqpcr-1.50.0.drv | ||
| i686-linux | /gnu/store/q14bix912c73d95qiv8566wdxv099fjm-r-htqpcr-1.50.0.drv | ||
| i586-gnu | /gnu/store/vbi2482c8m1dwpd1lvh9niq4wayf9aab-r-htqpcr-1.50.0.drv | ||
| armhf-linux | /gnu/store/gq8wcpfp458xw3lir0zzx1drny452j15-r-htqpcr-1.50.0.drv | ||
| aarch64-linux | /gnu/store/6ab2xd4n4q4b7vnsnp7fz9ydjydcqsxv-r-htqpcr-1.50.0.drv |
| Linter | Message | Location |
|---|---|---|
| No lint warnings ✓ | ||