Quantification from RNA-seq reads using lightweight alignments
Salmon is a program to produce highly-accurate, transcript-level quantification estimates from RNA-seq data. Salmon achieves its accuracy and speed via a number of different innovations, including the use of lightweight alignments (accurate but fast-to-compute proxies for traditional read alignments) and massively-parallel stochastic collapsed variational inference.
System | Target | Derivation | Build status |
---|---|---|---|
x86_64-linux | /gnu/store/2nm60nrpb5272srfaj2f601dgz1f91sb-salmon-0.13.1.drv | ||
x86_64-linux | arm-linux-gnueabihf | /gnu/store/wh694g5aaxad2csvwfj5rakhrdsbky84-salmon-0.13.1.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/8kmwas5xlbd3s8z1ndh4r6csf3ns86vc-salmon-0.13.1.drv | |
mips64el-linux | /gnu/store/7h9gidms0hkgcrr4zm7947ra83ahbg9x-salmon-0.13.1.drv | ||
i686-linux | /gnu/store/spkwln82ff2rfcxfdb5pkqs3m0ciahm3-salmon-0.13.1.drv | ||
armhf-linux | /gnu/store/93kk0d39k3jqr1afln54zbjxcv7rqf8x-salmon-0.13.1.drv | ||
aarch64-linux | /gnu/store/l0wpbl11vl8ai3s39dmvqczgranlqzhx-salmon-0.13.1.drv |
Linter | Message | Location |
---|---|---|
formatting Look for formatting issues in the source | line 12037 is way too long (99 characters) |