Quantification from RNA-seq reads using lightweight alignments
Salmon is a program to produce highly-accurate, transcript-level quantification estimates from RNA-seq data. Salmon achieves its accuracy and speed via a number of different innovations, including the use of lightweight alignments (accurate but fast-to-compute proxies for traditional read alignments) and massively-parallel stochastic collapsed variational inference.
System | Target | Derivation | Build status |
---|---|---|---|
x86_64-linux | /gnu/store/29fwxzl2fg3gm92iyzv492ibb7fjrsmq-salmon-0.13.1.drv | ||
i686-linux | /gnu/store/s8wa1mfrchmjxy2ymkdzyr7p6zgrxs3z-salmon-0.13.1.drv |
Linter | Message | Location |
---|---|---|
formatting Look for formatting issues in the source | line 11858 is way too long (99 characters) |