Mark duplicates in paired-end SAM files
Samblaster is a fast and flexible program for marking duplicates in read-id grouped paired-end SAM files. It can also optionally output discordant read pairs and/or split read mappings to separate SAM files, and/or unmapped/clipped reads to a separate FASTQ file. When marking duplicates, samblaster will require approximately 20MB of memory per 1M read pairs.
System | Target | Derivation | Build status |
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x86_64-linux | /gnu/store/5cy38pbbkm0a9nsh1kxxc5jl3xi587r1-samblaster-0.1.24.drv | ||
mips64el-linux | /gnu/store/k2nfqvc3mdgak83j0a67n8nn1vf66jdm-samblaster-0.1.24.drv | ||
i686-linux | /gnu/store/0nzvncv93i5k0r28x2n7hwmbs6qy2kvm-samblaster-0.1.24.drv | ||
armhf-linux | /gnu/store/8slzhpys39m0vr8b8h94j0kr1jvzajz5-samblaster-0.1.24.drv | ||
aarch64-linux | /gnu/store/0zflqfjlp76qqm8i94a7bachkckycym3-samblaster-0.1.24.drv |
Linter | Message | Location |
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description Validate package descriptions | sentences in description should be followed by two spaces; possible infraction at 263 |