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Package: pigx @ 0.0.3

Synopsis

Analysis pipelines for genomics

Description

PiGx is a collection of genomics pipelines. It includes the following pipelines:

  • PiGx BSseq for raw fastq read data of bisulfite experiments

  • PiGx RNAseq for RNAseq samples

  • PiGx scRNAseq for single cell dropseq analysis

  • PiGx ChIPseq for reads from ChIPseq experiments

All pipelines are easily configured with a simple sample sheet and a descriptive settings file. The result is a set of comprehensive, interactive HTML reports with interesting findings about your samples.

Home page
http://bioinformatics.mdc-berlin.de/pigx/
Location
gnu/packages/bioinformatics.scm (line: 12825, column: 2)
License

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