RNA-seq quality control package
RSeQC provides a number of modules that can comprehensively evaluate high throughput sequence data, especially RNA-seq data. Some basic modules inspect sequence quality, nucleotide composition bias, PCR bias and GC bias, while RNA-seq specific modules evaluate sequencing saturation, mapped reads distribution, coverage uniformity, strand specificity, etc.
System | Target | Derivation | Build status |
---|---|---|---|
x86_64-linux | /gnu/store/jpxadnpv8s81bgq36nbvrxwzlv0qqj9j-rseqc-2.6.1.drv | ||
mips64el-linux | /gnu/store/j20nkk2qhg3v8a44i6vdj0y297n7qk1y-rseqc-2.6.1.drv | ||
i686-linux | /gnu/store/rbsw8i5dqlhjclpv68iqbbk9d7x0vsyb-rseqc-2.6.1.drv | ||
armhf-linux | /gnu/store/wk8fm9gri4cm4ifpmf8q8bb2zw2f9dnw-rseqc-2.6.1.drv | ||
aarch64-linux | /gnu/store/mxsb5mrgd4yxkcj118ddhdfvv1b17q3n-rseqc-2.6.1.drv |
Linter | Message | Location |
---|---|---|
inputs-should-be-native Identify inputs that should be native inputs | 'python2-cython' should probably be a native input | |
derivation Report failure to compile a package to a derivation | failed to create i686-linux derivation: path ‘/gnu/store/imq41gd3q2767il9gq6mqh5cv44x09rf-guile-2.2.6.drv’ is not valid | |
derivation Report failure to compile a package to a derivation | failed to create armhf-linux derivation: path ‘/gnu/store/132aqp4qjfys7abpr30jklkd33dl5lc1-patch-2.7.6.drv’ is not valid | |
derivation Report failure to compile a package to a derivation | failed to create aarch64-linux derivation: path ‘/gnu/store/0afbxr7962z9ci6kw840n088qsmyz8lr-guile-2.2.6.drv’ is not valid | |
derivation Report failure to compile a package to a derivation | failed to create mips64el-linux derivation: path ‘/gnu/store/jmxqjk7ihjszafbka35vhgkx2vm8mrlw-guile-2.2.6.drv’ is not valid |