Language

Package: mosaicatcher @ 0.3.1

Synopsis

Count and classify Strand-seq reads

Description

Mosaicatcher counts Strand-seq reads and classifies strand states of each chromosome in each cell using a Hidden Markov Model.

Home page
https://github.com/friendsofstrandseq/mosaicatcher
Location
gnu/packages/bioinformatics.scm (line: 5989, column: 2)
License

Derivations

SystemTargetDerivationBuild status
x86_64-linux/gnu/store/gxl2naxcg7q76f1hw1vinafn9qgz5bk7-mosaicatcher-0.3.1.drv
    x86_64-linuxx86_64-w64-mingw32/gnu/store/0nmbdjhbxamw0fifksgm6bcvy58bq9cm-mosaicatcher-0.3.1.drv
    x86_64-linuxriscv64-linux-gnu/gnu/store/wi0jl8a725pwsxv1c042ds5w34hyi33k-mosaicatcher-0.3.1.drv
    x86_64-linuxpowerpc-linux-gnu/gnu/store/sl5dqqxqnk2pw6qw1rhv8f6h9rr03jmd-mosaicatcher-0.3.1.drv
    x86_64-linuxpowerpc64le-linux-gnu/gnu/store/wrnasnv8xmk16x7f3kld10waqdway55m-mosaicatcher-0.3.1.drv
    x86_64-linuxmips64el-linux-gnu/gnu/store/i79wf5pdx8ya798mmcmk3rsjjv64ib9f-mosaicatcher-0.3.1.drv
    x86_64-linuxi686-w64-mingw32/gnu/store/3snc22jr2ap1dbygmdndxla6wm5i1xd2-mosaicatcher-0.3.1.drv
    x86_64-linuxi586-pc-gnu/gnu/store/d6kn54l8kphzb7228jbhh14wb2jc5mda-mosaicatcher-0.3.1.drv
    x86_64-linuxarm-linux-gnueabihf/gnu/store/m3wjid9kji8bdzwsy41qgwbc5lphzab1-mosaicatcher-0.3.1.drv
    x86_64-linuxaarch64-linux-gnu/gnu/store/im8pyy15crqcf5cz4mp7nx7y82c17a7q-mosaicatcher-0.3.1.drv
    riscv64-linux/gnu/store/hbizwb7bdk6zgq5b5lvg5bfzps8k2kbw-mosaicatcher-0.3.1.drv
      powerpc-linux/gnu/store/0gl0m3hw4dzvv75vwm3mxm5r8lkmd6v3-mosaicatcher-0.3.1.drv
        powerpc64le-linux/gnu/store/6lvgbm1iy68l8my5gjjli2z4hywpyvvq-mosaicatcher-0.3.1.drv
        mips64el-linux/gnu/store/yp6mr99hdc0b352r6jsgcrnnbv6k0bkc-mosaicatcher-0.3.1.drv
          i686-linux/gnu/store/dbvmw1h1j0j1mp6b3mprmgyd625zaljr-mosaicatcher-0.3.1.drv
          i586-gnu/gnu/store/7mcpj0hkwvpmv8psvr7m5mxryhhhic9w-mosaicatcher-0.3.1.drv
          armhf-linux/gnu/store/scx6wwlpsb5cczjwyzkbw7pkvdjamc4g-mosaicatcher-0.3.1.drv
          aarch64-linux/gnu/store/vkhpv4qfkdl3zn1ilp7ph1yg8sh9z7ql-mosaicatcher-0.3.1.drv

          Lint warnings

          LinterMessageLocation
          patch-headers

          Validate patch headers

          mosaicatcher-unbundle-htslib.patch: patch lacks comment and upstream status