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Package: trf @ 4.09.1

Synopsis

Tandem Repeats Finder: a program to analyze DNA sequences

Description

A tandem repeat in DNA is two or more adjacent, approximate copies of a pattern of nucleotides. Tandem Repeats Finder is a program to locate and display tandem repeats in DNA sequences. In order to use the program, the user submits a sequence in FASTA format. The output consists of two files: a repeat table file and an alignment file. Submitted sequences may be of arbitrary length. Repeats with pattern size in the range from 1 to 2000 bases are detected.

Home page
https://github.com/Benson-Genomics-Lab/TRF
Location
gnu/packages/bioinformatics.scm (line: 3060, column: 2)
License

Derivations

SystemTargetDerivationBuild status
x86_64-linux/gnu/store/ri1w5dz15b7bjb9w9nzg007pmrfsp89g-trf-4.09.1.drv
x86_64-linuxx86_64-w64-mingw32/gnu/store/mqih95w9qfd774grxxk98p89ccg1ljhg-trf-4.09.1.drv
x86_64-linuxriscv64-linux-gnu/gnu/store/m06gikfw56b94x7bm2jvm594m30scsfd-trf-4.09.1.drv
x86_64-linuxpowerpc-linux-gnu/gnu/store/4s21j1k4ncrwalw3svqvgfkva1q926sr-trf-4.09.1.drv
x86_64-linuxpowerpc64le-linux-gnu/gnu/store/9gwzm6pqnjbwvim1rqab5d29lfa5rz0r-trf-4.09.1.drv
x86_64-linuxmips64el-linux-gnu/gnu/store/dni1k9xkyk4wnjz0ackra2vb1gs0d9cq-trf-4.09.1.drv
x86_64-linuxi686-w64-mingw32/gnu/store/w2xfaflsazszxcfifr9grxanvr0w1q4n-trf-4.09.1.drv
x86_64-linuxi586-pc-gnu/gnu/store/bhnm88zislg0gas2am0vvfhm64w31kx2-trf-4.09.1.drv
x86_64-linuxarm-linux-gnueabihf/gnu/store/51lin5qcidf6nqjq0ck7cf437ivs2ww7-trf-4.09.1.drv
x86_64-linuxaarch64-linux-gnu/gnu/store/4qrnykfg54n67vfyn3dydqrsd4xdx8sh-trf-4.09.1.drv
riscv64-linux/gnu/store/9zh78d097abpb0vyf29jhs5mn0np1s9a-trf-4.09.1.drv
    powerpc-linux/gnu/store/7q98myyzr0894vmcymqwnvkn3lv77igg-trf-4.09.1.drv
      powerpc64le-linux/gnu/store/b6cn777p7yp087c8ql7ib4nmmg15zvwc-trf-4.09.1.drv
      mips64el-linux/gnu/store/a2v6wwmp38rskliv0v7sil5pxb85nv03-trf-4.09.1.drv
        i686-linux/gnu/store/qpclkgfsn1vp7xybjm07rq313f6xjd11-trf-4.09.1.drv
        i586-gnu/gnu/store/h2mymyfpkn3c2gs6ckvf44s1zbc95kpr-trf-4.09.1.drv
        armhf-linux/gnu/store/xhwxdcfli7mifbyl7zkhpm44bz53pym7-trf-4.09.1.drv
        aarch64-linux/gnu/store/gn9mynw3h8gabg3b6av9jzhqiblpv14g-trf-4.09.1.drv

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