Count and classify Strand-seq reads
Mosaicatcher counts Strand-seq reads and classifies strand states of each chromosome in each cell using a Hidden Markov Model.
System | Target | Derivation | Build status |
---|---|---|---|
x86_64-linux | /gnu/store/7bcl3gzalzgi9g2l4s81bzm2q6gs8vsc-mosaicatcher-0.3.1.drv | ||
x86_64-linux | i586-pc-gnu | /gnu/store/c691amsfhsg1f287ch8mbr116lqmwlpi-mosaicatcher-0.3.1.drv | |
x86_64-linux | arm-linux-gnueabihf | /gnu/store/ka9fvv7cicl9f7zk6z2hr1045a5g73ws-mosaicatcher-0.3.1.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/n4l3h2llkxqcp1ipajs7sdvv9hknfwrs-mosaicatcher-0.3.1.drv | |
powerpc64le-linux | /gnu/store/bhvayq1rszbv77jvq4wkxzbjqbxaqdqs-mosaicatcher-0.3.1.drv | ||
mips64el-linux | /gnu/store/23zxql73bm0295fdg2vn06bv68ifwygn-mosaicatcher-0.3.1.drv | ||
i686-linux | /gnu/store/zxah3m6zhyb6znr0wsb3jgbr0afrkdvn-mosaicatcher-0.3.1.drv | ||
i586-gnu | /gnu/store/mnim5cai84asl5jfz277h0ivs3hh6dr5-mosaicatcher-0.3.1.drv | ||
armhf-linux | /gnu/store/r8mw47z999rbqka96cgvg4d6vqb4p17d-mosaicatcher-0.3.1.drv | ||
aarch64-linux | /gnu/store/90vs6jy5hxaxvi0lji1256yf94z9y2y1-mosaicatcher-0.3.1.drv |
Linter | Message | Location |
---|---|---|
patch-headers Validate patch headers | mosaicatcher-unbundle-htslib.patch: patch lacks comment and upstream status |