RNA-seq quality control package
RSeQC provides a number of modules that can comprehensively evaluate high throughput sequence data, especially RNA-seq data. Some basic modules inspect sequence quality, nucleotide composition bias, PCR bias and GC bias, while RNA-seq specific modules evaluate sequencing saturation, mapped reads distribution, coverage uniformity, strand specificity, etc.
System | Target | Derivation | Build status |
---|---|---|---|
x86_64-linux | /gnu/store/b6n9qadixzgyr7bs8380wg7cisimk5hr-rseqc-3.0.1.drv | ||
powerpc64le-linux | /gnu/store/7vypx444af7zycag6abj9pbdplzvdh0g-rseqc-3.0.1.drv | ||
mips64el-linux | /gnu/store/fn1sqjj3aclhvd984xmainv8w5cn0ihh-rseqc-3.0.1.drv | ||
i686-linux | /gnu/store/hf78anwgfxpcb6h55mz5vydbj1wksf07-rseqc-3.0.1.drv | ||
i586-gnu | /gnu/store/w28icv08k91pskd8any7y8i7hpjy8222-rseqc-3.0.1.drv | ||
armhf-linux | /gnu/store/3p055g2j2xwrdwd87bq8v2w26yfmc6qv-rseqc-3.0.1.drv | ||
aarch64-linux | /gnu/store/w1rg9lm2q3z3fimql8nfkpbpd1a9z93r-rseqc-3.0.1.drv |
Linter | Message | Location |
---|---|---|
inputs-should-be-native Identify inputs that should be native inputs | 'python-cython' should probably be a native input |