RNA-seq quality control package
RSeQC provides a number of modules that can comprehensively evaluate high throughput sequence data, especially RNA-seq data. Some basic modules inspect sequence quality, nucleotide composition bias, PCR bias and GC bias, while RNA-seq specific modules evaluate sequencing saturation, mapped reads distribution, coverage uniformity, strand specificity, etc.
System | Target | Derivation | Build status |
---|---|---|---|
x86_64-linux | /gnu/store/kk7xc3wf31mhw2xn0836zj67c5lsmvxi-rseqc-3.0.1.drv | ||
powerpc64le-linux | /gnu/store/lj6qk5fv3nb3w5jnml0jlr6m2fqh8w5j-rseqc-3.0.1.drv | ||
mips64el-linux | /gnu/store/bzj4g1f7whzqimfdzvx161zp9ik5hn03-rseqc-3.0.1.drv | ||
i686-linux | /gnu/store/mm0iflmpyrjzbhpxqwr2w44sk46yn7ff-rseqc-3.0.1.drv | ||
i586-gnu | /gnu/store/gsrxp1daljj91y53i58xl3iapfz6v91f-rseqc-3.0.1.drv | ||
armhf-linux | /gnu/store/j4dfh8glsar7nh512dfmapxrxaxpxgj5-rseqc-3.0.1.drv | ||
aarch64-linux | /gnu/store/wh8p62nldjnyvq9n9g9l33nwz469lsr9-rseqc-3.0.1.drv |
Linter | Message | Location |
---|---|---|
inputs-should-be-native Identify inputs that should be native inputs | 'python-cython' should probably be a native input |