Quantification from RNA-seq reads using lightweight alignments
Salmon is a program to produce highly-accurate, transcript-level quantification estimates from RNA-seq data. Salmon achieves its accuracy and speed via a number of different innovations, including the use of lightweight alignments (accurate but fast-to-compute proxies for traditional read alignments) and massively-parallel stochastic collapsed variational inference.
System | Target | Derivation | Build status |
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x86_64-linux | /gnu/store/hl46fjsmwv385fhvdl0jhpk9a5kvgq3l-salmon-0.13.1.drv | ||
x86_64-linux | arm-linux-gnueabihf | /gnu/store/lbm5l9hmp8a60y5qhvls30dsgbazgxj1-salmon-0.13.1.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/s8g0jh5yxg2yrpq8ifmnp5d965bizx7f-salmon-0.13.1.drv | |
mips64el-linux | /gnu/store/171zvnzc44zimdlwy9r9vk5d8jn5s4kn-salmon-0.13.1.drv | ||
i686-linux | /gnu/store/zid9p4kqlk3s6yx1qz89d7v2avgqw691-salmon-0.13.1.drv | ||
armhf-linux | /gnu/store/rb710mpylc4i02pckyb8pzfkpqkxfvqm-salmon-0.13.1.drv | ||
aarch64-linux | /gnu/store/glj7b543216lyjr5pnd0d1vwzvx5i8sy-salmon-0.13.1.drv |
Linter | Message | Location |
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formatting Look for formatting issues in the source | line 11892 is way too long (99 characters) |