Quantification from RNA-seq reads using lightweight alignments
Salmon is a program to produce highly-accurate, transcript-level quantification estimates from RNA-seq data. Salmon achieves its accuracy and speed via a number of different innovations, including the use of lightweight alignments (accurate but fast-to-compute proxies for traditional read alignments) and massively-parallel stochastic collapsed variational inference.
System | Target | Derivation | Build status |
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x86_64-linux | /gnu/store/9wf51gybqzqr74kls85c6gn5i9m39f7v-salmon-0.13.1.drv | ||
x86_64-linux | i586-pc-gnu | /gnu/store/050ijks0h4yfkcx8mzm1xp1kd9014cd3-salmon-0.13.1.drv | |
x86_64-linux | arm-linux-gnueabihf | /gnu/store/2ac3rm97ycnqlfmp7alyqm44vykrhnki-salmon-0.13.1.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/x8rnmijwb71srafx5l1265r58n9lz21h-salmon-0.13.1.drv | |
mips64el-linux | /gnu/store/hy8gwqs0b6l9c91g3ng8y06kd496084v-salmon-0.13.1.drv | ||
i686-linux | /gnu/store/ryhf94hdwiz3bnxz9hn3qgb4w4hhwclr-salmon-0.13.1.drv | ||
i586-gnu | /gnu/store/wggkp23z1i5k5ngsbac9lcji63x2plml-salmon-0.13.1.drv | ||
armhf-linux | /gnu/store/5h8m86sj901i980n53qyfqx17rial231-salmon-0.13.1.drv | ||
aarch64-linux | /gnu/store/9dshyk8azkgqqjyl61s4hhw7k4a4c5hq-salmon-0.13.1.drv |
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formatting Look for formatting issues in the source | line 12228 is way too long (99 characters) |