Quantification from RNA-seq reads using lightweight alignments
Salmon is a program to produce highly-accurate, transcript-level quantification estimates from RNA-seq data. Salmon achieves its accuracy and speed via a number of different innovations, including the use of lightweight alignments (accurate but fast-to-compute proxies for traditional read alignments) and massively-parallel stochastic collapsed variational inference.
System | Target | Derivation | Build status |
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x86_64-linux | /gnu/store/l9agy9k4laxwc9b8dzsqd4dfy6cmqqzv-salmon-0.13.1.drv | ||
x86_64-linux | i586-pc-gnu | /gnu/store/alikfnl0msbxgrapy7001kpa9vgqypj6-salmon-0.13.1.drv | |
x86_64-linux | arm-linux-gnueabihf | /gnu/store/lf1nnfmkv02jb3nmaw82v3qz3jacvrys-salmon-0.13.1.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/5fzdl6mxrzyzrn57hp751xs3mdhjvkkr-salmon-0.13.1.drv | |
powerpc64le-linux | /gnu/store/2n09hxvkw8why33r4nhkdw1wm95ca9wk-salmon-0.13.1.drv | ||
mips64el-linux | /gnu/store/lh82v59ri09rn3jw98li1skshzr2g0ri-salmon-0.13.1.drv | ||
i686-linux | /gnu/store/39l7kiyg6l2vld5hhgffi96fq8kg07xn-salmon-0.13.1.drv | ||
i586-gnu | /gnu/store/2y6dvfq6572qldnbbh91giwk945jc25j-salmon-0.13.1.drv | ||
armhf-linux | /gnu/store/n1c0i2r1pfkz2brkn32nyaqw8akyhfvs-salmon-0.13.1.drv | ||
aarch64-linux | /gnu/store/y250kc1hd4r0yjiwj4sbm5mw3nwq6dmb-salmon-0.13.1.drv |
Linter | Message | Location |
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formatting Look for formatting issues in the source | line 11029 is way too long (99 characters) |