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Package: mosaicatcher @ 0.3.1

Synopsis

Count and classify Strand-seq reads

Description

Mosaicatcher counts Strand-seq reads and classifies strand states of each chromosome in each cell using a Hidden Markov Model.

Home page
https://github.com/friendsofstrandseq/mosaicatcher
Location
gnu/packages/bioinformatics.scm (line: 5951, column: 2)
License

Derivations

SystemTargetDerivationBuild status
x86_64-linux/gnu/store/qn2bf3m0bvqaw0sidcxvxg26ijf899l4-mosaicatcher-0.3.1.drv
    x86_64-linuxx86_64-w64-mingw32/gnu/store/gaj9fsxvmry4839qxv4vxwlki9f9ng9f-mosaicatcher-0.3.1.drv
    x86_64-linuxriscv64-linux-gnu/gnu/store/va6q54dcq5wajhbi4szpb9f55pfi18nc-mosaicatcher-0.3.1.drv
    x86_64-linuxpowerpc-linux-gnu/gnu/store/d759ih7l6ydg6vl4wpbcpip0w9p3mdna-mosaicatcher-0.3.1.drv
    x86_64-linuxpowerpc64le-linux-gnu/gnu/store/p46mmwsfa40bnwwd57581p5lzz1j674m-mosaicatcher-0.3.1.drv
    x86_64-linuxmips64el-linux-gnu/gnu/store/gw6ngflap0ax84a2azjwvbhn4h567xrg-mosaicatcher-0.3.1.drv
    x86_64-linuxi686-w64-mingw32/gnu/store/cnisw3qq7n0x44yyvabbg53ayccgz2y5-mosaicatcher-0.3.1.drv
    x86_64-linuxi586-pc-gnu/gnu/store/mrj3b1bvxjpp1bmgy9fa3fiddd8mxljf-mosaicatcher-0.3.1.drv
    x86_64-linuxarm-linux-gnueabihf/gnu/store/c2sc451f7byjyf6hwwcja99v9j0fr793-mosaicatcher-0.3.1.drv
    x86_64-linuxaarch64-linux-gnu/gnu/store/63iisy68c9jl2ryg76c0iamd9f7hymq1-mosaicatcher-0.3.1.drv
    riscv64-linux/gnu/store/8sdkr4nphl1g3vzjdwbbq2nymjmas9bb-mosaicatcher-0.3.1.drv
      powerpc-linux/gnu/store/ff089p2r8jf5p8ghlgq411w45rq4yis0-mosaicatcher-0.3.1.drv
        powerpc64le-linux/gnu/store/dk43xx6q46wdjbnqzwnilv23g7js15vv-mosaicatcher-0.3.1.drv
        mips64el-linux/gnu/store/ms1jydi5x0592si7ci1kxd2jj7l9g6jd-mosaicatcher-0.3.1.drv
          i686-linux/gnu/store/0kl4w2yxlqlj8kjx0y9q36f5dfd6mmkf-mosaicatcher-0.3.1.drv
          i586-gnu/gnu/store/dqmpv95lw6wvcr9qbi2ws01mwirvnmxf-mosaicatcher-0.3.1.drv
          armhf-linux/gnu/store/3mbfp0qvchag8nj0r3di2bai2xmg6dzg-mosaicatcher-0.3.1.drv
          aarch64-linux/gnu/store/bwfdpgfm9j98y5zl8l2l8haf38gzz15q-mosaicatcher-0.3.1.drv

          Lint warnings

          LinterMessageLocation
          patch-headers

          Validate patch headers

          mosaicatcher-unbundle-htslib.patch: patch lacks comment and upstream status