RNA-seq quality control package
RSeQC provides a number of modules that can comprehensively evaluate high throughput sequence data, especially RNA-seq data. Some basic modules inspect sequence quality, nucleotide composition bias, PCR bias and GC bias, while RNA-seq specific modules evaluate sequencing saturation, mapped reads distribution, coverage uniformity, strand specificity, etc.
| System | Target | Derivation | Build status |
|---|---|---|---|
| x86_64-linux | /gnu/store/z9c9sr57hk94x89vl52m1v1x20cl4fk8-rseqc-3.0.1.drv | ||
| x86_64-gnu | /gnu/store/8wrqaizmjcdccdkp4z6zz1nd81sbaz9i-rseqc-3.0.1.drv | ||
| riscv64-linux | /gnu/store/sd41id9kckkiyr53cx239y1jkkgzilxl-rseqc-3.0.1.drv | ||
| powerpc-linux | /gnu/store/ml6rnhy7wp12wfcbvg0yb3jg7n9lzmxj-rseqc-3.0.1.drv | ||
| powerpc64le-linux | /gnu/store/dzw963dqnarv24x8pcs0xs558zmapdmn-rseqc-3.0.1.drv | ||
| mips64el-linux | /gnu/store/2y1h3ybd0gdcgiz26pi5v5wgpvr4mf2m-rseqc-3.0.1.drv | ||
| i686-linux | /gnu/store/ry8cyl3scx09vb0wnr6z5z5gxrpm149b-rseqc-3.0.1.drv | ||
| i586-gnu | /gnu/store/78qm8qbfbi2mhd60ddcv65xw6fi75p2d-rseqc-3.0.1.drv | ||
| armhf-linux | /gnu/store/np5vj7gpl5jpz1s6kx87pww9fpshs571-rseqc-3.0.1.drv | ||
| aarch64-linux | /gnu/store/ik11gw2hflgr6m1xp330didfjybs5gx4-rseqc-3.0.1.drv |
| Linter | Message | Location |
|---|---|---|
| inputs-should-be-native Identify inputs that should be native inputs | 'python-cython' should probably be a native input |
|